Cambridge Healthtech Institute’s 12th Annual

Optimizing Cell Line Development

Enhancing Expression

August 27 - 28, 2020 ALL TIMES EDT

As the biopharma field becomes increasingly more complex, engineering cell lines remains a foundation for developing biologics. This foundation draws from emerging research and breakthrough strategies to achieve cell lines that accomplish project goals quickly and inexpensively. The Optimizing Cell Line Development conference brings together experts who will share how to best optimize codons, construct vectors, and select and engineer clones and host systems, while maintaining stability and consistency. The conference will also focus on automation, high-throughput, genomic research, glycoengineering, systems biology, and pathway delineation.

Thursday, August 27

ADVANCING CELL LINE DEVELOPMENT

12:35 pm KEYNOTE PRESENTATION: At the R&D Interface: From Early Candidate Screen to Fast Manufacturing Cell Line Development and Optimization
Zorica Dragic, PhD, Director, Cell LIne Screening and Development, Novartis Pharma AG
12:55 pm Glycosylation Screening Methods to Support Cell Line Development
Manfred Wuhrer, PhD, Professor & Head, Center for Proteomics & Metabolomics, Leiden University Medical Center

Glycosylation is an important factor for the efficacy and safety of many biopharmaceuticals. Cell lines differ vastly in their glycosylation potential, and assessing, as well as engineering, glycosylation is gaining importance in the early development of biopharmaceuticals. A range of mass spectrometric methods will be presented for the facile, high-resolution assessment of glycosylation at the cellular and molecular levels to support early development and clone selection.

John Gill, Director, CDO R&D Team, Cell Line Development, Samsung Biologics

It can be a critical decision by any institution to select right host cell line; it can impact quality, cost of goods and timeline. The presentation describes development studies of S-CHOice, Samsung’s proprietary cell line, which can help achieve high quality product, adding value to Samsung’s one-stop CDMO capability.

1:35 pm LIVE Q&A:

Session Wrap-Up

Panel Moderator:
Derrick C. Scott, PhD, Assistant Professor and Director, Bioinformatics, Delaware State University
Panelists:
Zorica Dragic, PhD, Director, Cell LIne Screening and Development, Novartis Pharma AG
Manfred Wuhrer, PhD, Professor & Head, Center for Proteomics & Metabolomics, Leiden University Medical Center
John Gill, Director, CDO R&D Team, Cell Line Development, Samsung Biologics
1:55 pm Refresh Break - View Our Virtual Exhibit Hall

PRODUCTIVITY ANALYTICS

2:15 pm Cell Line Development for Multi-Specific Antibodies Guided by High-Throughput Mispairing Screening of Harvest
Fateme Tousi, PhD, Scientist, Bioanalytics/Biologics Development, Sanofi Genzyme

Correct assembly of subunits in multi-specific antibody therapeutics is a critical quality attribute (CQA) with direct impact on biological activity. Here, we describe a high-throughput mass spectrometry-based analytical platform for screening large numbers of clones for their chain mispairing levels directly in clarified harvest. Our study of various multispecific constructs revealed that chain mispairing is not only dependent on the sequence and structure, but also a characteristic of the clone and can be mitigated at clone selection stage.

2:35 pm Integrating High‐Throughput Analytics and Cell Imaging to Assess Early Productivity and Product Quality
Jishna Ganguly, MSc, Associate Research Scientist, Center of Excellence for Early Process Development, GlaxoSmithKline plc

Under current regulatory guidelines, cell-line development for therapeutic proteins is resource and labor intensive.  Integration of high throughput fluorescence-activated cell sorting (FACS), Luminex multi-analyte profiling and Solentim cell imaging methods has enabled analysis of thousands of monoclonal cell-colonies in 96-well plate format.

FACS and imaging avoid time consuming  dilution cloning  experiments and yield a significantly greater assurance of cell monoclonality.  Early clone characterization by highly sensitive Luminex technology allows us to identify the top 20-40 clones from large pools, bypassing intensive intermediate process steps involving several hundred clones.

Following this approach, we completed, in parallel, cell-line development for two antigen variants within time and resource scope of a single antigen, accelerating  the task  by several months compared to traditional cloning timelines. 

The top clones were assessed for scalability and process compatibility in high-throughput automated mini-bioreactors and they met all critical quality attributes. This strategy can be readily implemented as a platform approach for accelerating cell-line development.

2:55 pm LIVE Q&A:

Session Wrap Up

Panel Moderator:
Derrick C. Scott, PhD, Assistant Professor and Director, Bioinformatics, Delaware State University
Panelists:
Jishna Ganguly, MSc, Associate Research Scientist, Center of Excellence for Early Process Development, GlaxoSmithKline plc
Fateme Tousi, PhD, Scientist, Bioanalytics/Biologics Development, Sanofi Genzyme
3:15 pm Happy Hour - View Our Virtual Exhibit Hall
3:50 pm Close of Day

Friday, August 28

HARNESSING OMICS TO SUPPORT CELL LINE DEVELOPMENT

10:05 am Proteomic and Epigenetic Analysis of Cell Lines with Differing Productivities
Susan Sharfstein, PhD, Professor, Nanobioscience, Nanoscale Science and Engineering, SUNY Polytechnic Institute

Selection of high-productivity clones relies on large-scale screening efforts, examining thousands of cell lines. Despite technological advances, a fundamental understanding of differences between high- and low-productivity clones is still lacking. To address this issue, we evaluated proteomic and epigenetic differences between parental and DHFR-amplified CHO cell lines and among different clonal isolates. We observed global physiological changes in high-productivity clones and differential methylation of the CMV promoter, suggesting avenues for cellular engineering. In particular, increased productivity correlated with substantial changes in ribosomal proteins, endoplasmic reticulum chaperones and primary metabolism.

10:25 am Proteomic Analysis of CHO Cell Clones Prone to Proteolytic Clipping
Paula Meleady, PhD, Associate Director, National Institute for Cellular Biotechnology, Dublin City University

Product degradation, such as clipping, is a common quality issue in the production of biotherapeutics from Chinese hamster ovary (CHO) cells. In this study, we applied differential quantitative label-free LC-MS/MS proteomic analysis to
understand more fundamentally the intracellular events that may play a role in determining why cell lines from the same cell line development project can vary with regards to the extent of biotherapeutic product clipping.

10:45 am RNA-Seq: A Transcriptomics Approach to Understanding Genome Instability, Protein Production, and Metabolomics in CHO Cells to Lower the Costs of Medicine
Derrick C. Scott, PhD, Assistant Professor and Director, Bioinformatics, Delaware State University

Recombinant therapeutic proteins are widely used to treat life-threatening diseases including cancer. Chinese hamster ovary (CHO) cells have been used for over 25 years in the biopharmaceutical industry to produce recombinant therapeutics. However, several limitations exist in CHO cell bioprocessing. Here, we discuss using RNA transcriptomics to discover genes important to the protein production process by increasing stabilization. This has potential to decrease costs of medicines by stabilizing CHO genomes.

11:05 am LIVE Q&A:

Session Wrap-Up

Panel Moderator:
Xiaotian Zhong, PhD, Senior Principal Scientist & Lab Head, BioMedicine Design, Pfizer Worldwide Research & Development
Panelists:
Paula Meleady, PhD, Associate Director, National Institute for Cellular Biotechnology, Dublin City University
Susan Sharfstein, PhD, Professor, Nanobioscience, Nanoscale Science and Engineering, SUNY Polytechnic Institute
Derrick C. Scott, PhD, Assistant Professor and Director, Bioinformatics, Delaware State University
11:25 am Coffee Break - View Our Virtual Exhibit Hall
11:35 am Problem Solving Breakout Discussions - View Our Virtual Exhibit Hall

This session provides the opportunity to discuss a focused topic with peers from around the world in an open, collegial setting. Select from the list of topics available and join the moderated discussion to share ideas, gain insights, establish collaborations or commiserate about persistent challenges. To mirror the interactivity of our in-person roundtables, we encourage "face time" with your fellow participants! The session will NOT be recorded and NOT available On Demand.

NEW APPROACHES FOR DEVELOPING SUCCESSFUL CELL LINES

Marieke Zhao, PhD, Associate Director, Cell Line Development, Mersana Therapeutics, Inc.

A case study will be presented where Next-Generation Sequencing (NGS) data was used to select cell lines with genetic diversity and low risk of instability. Besides information on the integration site and sequence variants, the data generated can be used to support selection of lead cell line candidates prior to stability studies. The benefits and limitations of Targeted Locus Amplification (TLA) data in driving cell line selection will be discussed, as well as its potential to facilitate workflows that further reduce timelines.

12:20 pm

Metabolomics Approach for Increasing CHO Cell Specific Productivity

Grace Yao, MS, Associate Scientist II, Upstream Bio-Process Development, Bristol-Myers Squibb Co.

CHO cell titers have increased over past decades, mainly due to higher cell densities and improved viability. As next-generation processes start to reach the upper limits of cell density, we need to better understand cell-specific productivity (qP) for further gains. Metabolomics tools can help us identify compounds of
interest that are related to qP, which can be used to supplement media or as potential biomarkers to speed clone selection.

12:40 pm Differentiated N-Glycan Modifications of AntiAging Klotho Protein by CHO and HEK293 Have Therapeutic Implications for Managing Kidney Disease
Xiaotian Zhong, PhD, Senior Principal Scientist & Lab Head, BioMedicine Design, Pfizer Worldwide Research & Development

Anti-aging protein αKlotho functions as a co-receptor for fibroblast growth factor 23 signaling, whereas its shed extracellular domain (sKlotho), carrying glycosidase activity, is a humoral factor that regulates renal health. Supplementation of sKlotho has emerged as a potential therapeutic strategy for managing kidney disease. This talk will describe how differentiated N-Glycan Modifications on Klotho Protein by CHOand HEK293-modulated protein folding and function, opens up opportunities in therapeutic engineering.

1:00 pm Process Development and Intensification for Antibody Production Using an Inducible CHO Cell Line
Olivier Henry, PhD, Professor, Chemical Engineering, Polytechnique de Montréal

Inducible mammalian expression systems offer an attractive platform for the production of recombinant proteins. The use of an inducible cell line allows the decoupling of growth and the production phases, thereby initially reducing the metabolic load imposed by the expression of the recombinant product. We have conducted process development and intensification for a cumate-inducible GS-CHO cell line and will identify the conditions resulting in enhanced product yield and glycan distribution.

1:20 pm LIVE Q&A:

Session Wrap-Up

Panel Moderator:
Paula Meleady, PhD, Associate Director, National Institute for Cellular Biotechnology, Dublin City University
Panelists:
Marieke Zhao, PhD, Associate Director, Cell Line Development, Mersana Therapeutics, Inc.
Grace Yao, MS, Associate Scientist II, Upstream Bio-Process Development, Bristol-Myers Squibb Co.
Xiaotian Zhong, PhD, Senior Principal Scientist & Lab Head, BioMedicine Design, Pfizer Worldwide Research & Development
Olivier Henry, PhD, Professor, Chemical Engineering, Polytechnique de Montréal
1:40 pm Close of Summit