Susan Sharfstein, PhD, Professor, Nanobioscience, Nanoscale Science and Engineering, SUNY Polytechnic Institute
Selection of high-productivity clones relies on large-scale screening efforts, examining thousands of cell lines. Despite technological advances, a fundamental understanding of differences between high- and low-productivity clones is still lacking. To address this issue, we evaluated proteomic and epigenetic differences between parental and DHFR-amplified CHO cell lines and among different clonal isolates. We observed global physiological changes in high-productivity clones and differential methylation of the CMV promoter, suggesting avenues for cellular engineering. In particular, increased productivity correlated with substantial changes in ribosomal proteins, endoplasmic reticulum chaperones and primary metabolism.